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Senior Bioinformatics Software Engineer

Lorven Technologies, Inc.

Remote • 5d ago

Easy Apply

Third Party, Contract

Depends on Experience

Sr Bioinformatics Software Engineer – Pipeline Development (Remote, US)

OMG Technologies

Remote • 3d ago

Easy Apply

Contract

Depends on Experience

Bioinformatics Engineer

Digital Dhara LLC

San Diego, California • 13d ago

Easy Apply

Contract, Third Party

45 - 55

Bioinformatics Software Engineer

Baylor Miraca Genetics Laboratories, LLC

Remote • Today

Full-time

Lead Bioinformatics Software Engineer

Quest Diagnostics Inc.

Marlborough, Massachusetts • Today

Full-time

USD 155,000.00 per year

Senior Bioinformatics Software Engineer

Baylor Miraca Genetics Laboratories, LLC

No location provided • Today

Full-time

Bioinformatics Software Engineer

Baylor Miraca Genetics Laboratories, LLC

Houston, Texas • Today

Full-time

Senior Bioinformatics Engineer

Illumina, Inc.

San Diego, California • Today

Full-time

USD 129,400.00 - 194,000.00 per year

Research Faculty - 12 Month Salaried (Open Rank) - Bioinformatics and Proteomics Software Development (NHMFL)

Florida State University

Tallahassee, Florida • Today

Full-time

Bioinformatics Analyst/Engineer

Parsons Services Company

Frederick, Maryland • Today

Full-time

USD 88,400.00 - 154,700.00 per year

Lead Bioinformatics Engineer

Flagship Pioneering, Inc.

Cambridge, Massachusetts • Today

Full-time

USD 128,000.00 - 176,000.00 per year

Senior Bioinformatics Analyst/Engineer

Parsons Services Company

Frederick, Maryland • Today

Full-time

USD 103,500.00 - 181,100.00 per year

Senior Bioinformatics & Genomics Data System Engineer

Natera, Inc.

Remote • Today

Full-time

USD 113,600.00 - 142,000.00 per year

Senior Bioinformatics & Genomics Data System Engineer

Natera, Inc.

San Carlos, California • Today

Full-time

USD 125,800.00 - 157,200.00 per year

Computational Biologist

Memorial Sloan Kettering Cancer Center

New York, New York • 7d ago

Full-time

USD 102,800.00 - 164,500.00 per year

Full Stack Software Workflow Engineer (PHP)

Quest Diagnostics Inc.

Marlborough, Massachusetts • Today

Full-time

USD 107,000.00 per year

Sr. LIMS/LIS Software Engineer

Quest Diagnostics Inc.

Marlborough, Massachusetts • Today

Full-time

USD 125,000.00 per year

Software/Data Engineer

Massachusetts Institute of Technology (MIT)

Lexington, Massachusetts • Today

Full-time

RUST programmer with Bioinformatics knowledge

VensIT Corp

Remote • 3d ago

Easy Apply

Full-time

150000 - 180000

Staff Software Engineer, Variant Classification

LabCorp

San Francisco, California • Today

Full-time

USD 100,000.00 - 198,000.00 per year

Sr Bioinformatics Scientist – Algorithm & Assay Development (Remote, US)

OMG Technologies

Remote • 3d ago

Easy Apply

Contract

Depends on Experience

Senior Researcher/Engineer: AI for Biomolecular Modelling and Simulation

Microsoft Corporation

No location provided • Today

Full-time

USD 119,800.00 - 234,700.00 per year

Senior Computational Biologist - Single-Cell Genomics & Machine Learning

Recruits Lab

New York, New York • Today

Full-time

Compensation information provided in the description

Senior Bioinformatics Scientist - AI/ML for Protein Engineering

Illumina, Inc.

San Diego, California • Today

Full-time

USD 129,400.00 - 194,000.00 per year

Computational Protein Engineer

AeroVironment

No location provided • Today

Full-time

Senior Bioinformatics & Molecular Systems Consultant

Medasource

Remote • Today

Contract

$85.00 - $115.00

Algorithm Engineer

Agilent Technologies

Santa Clara, California • Today

Full-time

USD 140,160.00 - 219,000.00 per year

Scientific Data Specialist Biologics Discovery (LIMS & Protein Engineering)

Infobahn Softworld Inc.

Spring House, Pennsylvania • Today

Easy Apply

Contract

$0.58/-

Scientist, Data Engineering

AstraZeneca

Santa Monica, California • Today

Full-time

USD 90,024.00 - 135,036.00 per year

Scientist III, Data Scientist, Bioprocess Digital Twin

Thermo Fisher Scientific

New York • Today

Full-time

USD 89,000.00 - 149,800.00 per year

Job Details

Skills

Bioinformatics
Python

Summary

Job Title: Senior Bioinformatics Software Engineer – Pipeline Development

Location: Remote (USA)

Summary:

The Senior Bioinformatics Software Engineer designs and delivers large-scale, clinical-grade bioinformatics platforms and pipelines supporting NGS diagnostic products.
The role is accountable for production software used in regulated environments, with emphasis on performance, reproducibility, and release rigor.
Specifically, the role supports Neo Genomics R&D in the development of new products and the improvement of existing ones by transforming R&D-level bioinformatics software into scalable, fast, robust, cost-effective, maintainable, regulated software suited to industrial-grade operations.
The ideal candidate has demonstrated experience building and scaling workflow-driven systems using technologies such as DRAGEN, NetFlow, Seqera Platform, and AWS Health Omics.

Responsibilities:

Pipeline and platform engineering

Design and implement scalable, clinical-grade NGS pipelines leveraging off-the-shelf and custom modules.
Develop and scale bioinformatics algorithms and pipelines into production-ready, regulatory-compliant software products.
Build and maintain workflow orchestration using Nextflow, with strong emphasis on reproducibility and observability.
Develop and optimise bioinformatics workloads in cloud environments, including AWS and AWS Health Omics.
Drive containerisation and environment reproducibility using Docker and/or Singularity.

Software development lifecycle

Own components of the software development lifecycle, including architecture, implementation, testing, and controlled release.
Implement robust CI/CD pipelines with automated regression testing and release validation for regulated software.
Contribute to software quality management documentation and software testing to ensure developed systems conform to regulatory standards.
Ensure auditability and traceability, and compliance with clinical software standards.
Produce and adhere to proper validation documentation.

Collaboration and leadership

Collaborate with algorithm and clinical teams to translate validated methods into production-grade software.
Interface with R&D bioinformatics, database development, and DevOps teams for prioritisation and organisation of development work.

Information security and compliance

Agree to abide by Employment and Confidentiality Agreements and End User Policies.
Commit to staying up to date on training requirements for HIPAA/GDPR.
Understand the importance of the proper handling and disposal of ePHI, and agree to follow HIPAA/GDPR regulations.
Abide by the requirements for the proper disposal of equipment containing ePHI.
Agree to report breaches and the improper handling of ePHI to the Company’s Privacy and Security Officers.

Education:

MS or PhD in computer science, bioinformatics, engineering, or a related field, with industry-level bioinformatics software development or engineering experience and a proven track record.

Experience:

Seven or more years of related experience; 5–8+ years of demonstrated experience in bioinformatics software engineering.

Essential

Demonstrated experience developing and maintaining large-scale, production bioinformatics systems in clinical or regulated environments.
Advanced-level Python development proficiency, including building testable, maintainable scientific software.
Strong expertise in workflow frameworks such as Nextflow, with experience using Seqera Platform in production settings.
Proven track record with development and optimisation for HPC/cloud platforms, including deploying and scaling pipelines in AWS.
Proficiency in working with Docker.
Experience with implementation and maintenance of NGS data analysis pipelines.
Proven experience implementing CI/CD, automated testing, and controlled release processes.
Proficiency in software versioning systems, e.g., Git, SVN.
Prior experience developing software in a regulated environment (ISO 13485, EN/IEC 62304, ISO 15189, or other).
Strong understanding of NGS assays (oncology preferred) and clinical-grade data processing requirements.

Desired

Hands-on experience with DRAGEN, Sentieon, or equivalent high-performance NGS analysis platforms.
Experience with AWS Health Omics or similar managed genomics platforms.
Experience with AWS products, including EC2, Batch, S3, and Lambda.
Proficiency in a compiled language, preferably C or C++.
Experience with algorithm and systems design for parallel computing.
Experience with Singularity or equivalent container runtimes.
Proficiency in R.

Employers have access to artificial intelligence language tools (“AI”) that help generate and enhance job descriptions and AI may have been used to create this description. The position description has been reviewed for accuracy and Dice believes it to correctly reflect the job opportunity.

Dice Id: 10120137
Position Id: 72565-10367-1793730299
Posted 5 days ago

Fitment

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Remote

•

3d ago

Sr Bioinformatics Software Engineer Pipeline Development (Remote, US) We are looking to hire a candidate with the mentioned skill sets and experience for one of our clients within the diagnostics and pharma services company. This is contracting and REMOTE role. Job Summary We are seeking an experienced Senior Bioinformatics Software Engineer to design, develop, and maintain scalable, production-grade NGS bioinformatics pipelines supporting clinical diagnostics and genomic applications. The ide

Easy Apply

Contract

Depends on Experience

Sr Bioinformatics Scientist – Algorithm & Assay Development (Remote, US)

Remote

•

3d ago

Sr Bioinformatics Scientist Algorithm & Assay Development (Remote, US) We are looking to hire a candidate with the mentioned skill sets and experience for one of our clients within the diagnostics and pharma services company. This is contracting and REMOTE role. Job Summary We are seeking an experienced Senior Bioinformatics Scientist to develop, optimize, and validate clinical-grade NGS algorithms supporting oncology diagnostics, liquid biopsy, and solid tumor genomic assays. The ideal candid

Easy Apply

Contract

Depends on Experience

Senior Bioinformatics & Genomics Data System Engineer

Remote

•

Today

This is an exciting opportunity at Natera (a global leader in precision medicine and genomics testing), for a Senior Bioinformatics & Genomics Data System Engineer position inside our Data Science Production Engineering (DSPE) department. You will have the opportunity to work with Natera's diverse and ultra-large data sets (up to PB size), build bioinformatics & genomics software tools and data systems for the most cutting-edge medical diagnostics and genomics applications, and make real impact

Full-time

USD 113,600.00 - 142,000.00 per year

Senior Bioinformatics & Molecular Systems Consultant

Remote

•

Today

Senior Bioinformatics & Molecular Systems Consultant Remote role Compensation: $90 - $115 per hour Contract: 6 months Start Date: 10/05/2026 ABOUT THE ROLE Our client is seeking a highly experienced Senior Bioinformatics & Molecular Systems Consultant for a 6-month contract to provide technical leadership, support, analysis, and optimization of critical laboratory informatics platforms supporting molecular diagnostics, cytogenetics, genomics, and clinical laboratory operations. In this senior-l

Contract

$85.00 - $115.00

Job Details

Skills

Bioinformatics
Python

Summary

Job Title: Senior Bioinformatics Software Engineer – Pipeline Development

Location: Remote (USA)

Summary:

The Senior Bioinformatics Software Engineer designs and delivers large-scale, clinical-grade bioinformatics platforms and pipelines supporting NGS diagnostic products.
The role is accountable for production software used in regulated environments, with emphasis on performance, reproducibility, and release rigor.
Specifically, the role supports Neo Genomics R&D in the development of new products and the improvement of existing ones by transforming R&D-level bioinformatics software into scalable, fast, robust, cost-effective, maintainable, regulated software suited to industrial-grade operations.
The ideal candidate has demonstrated experience building and scaling workflow-driven systems using technologies such as DRAGEN, NetFlow, Seqera Platform, and AWS Health Omics.

Responsibilities:

Pipeline and platform engineering

Design and implement scalable, clinical-grade NGS pipelines leveraging off-the-shelf and custom modules.
Develop and scale bioinformatics algorithms and pipelines into production-ready, regulatory-compliant software products.
Build and maintain workflow orchestration using Nextflow, with strong emphasis on reproducibility and observability.
Develop and optimise bioinformatics workloads in cloud environments, including AWS and AWS Health Omics.
Drive containerisation and environment reproducibility using Docker and/or Singularity.

Software development lifecycle

Own components of the software development lifecycle, including architecture, implementation, testing, and controlled release.
Implement robust CI/CD pipelines with automated regression testing and release validation for regulated software.
Contribute to software quality management documentation and software testing to ensure developed systems conform to regulatory standards.
Ensure auditability and traceability, and compliance with clinical software standards.
Produce and adhere to proper validation documentation.

Collaboration and leadership

Collaborate with algorithm and clinical teams to translate validated methods into production-grade software.
Interface with R&D bioinformatics, database development, and DevOps teams for prioritisation and organisation of development work.

Information security and compliance

Agree to abide by Employment and Confidentiality Agreements and End User Policies.
Commit to staying up to date on training requirements for HIPAA/GDPR.
Understand the importance of the proper handling and disposal of ePHI, and agree to follow HIPAA/GDPR regulations.
Abide by the requirements for the proper disposal of equipment containing ePHI.
Agree to report breaches and the improper handling of ePHI to the Company’s Privacy and Security Officers.

Education:

MS or PhD in computer science, bioinformatics, engineering, or a related field, with industry-level bioinformatics software development or engineering experience and a proven track record.

Experience:

Seven or more years of related experience; 5–8+ years of demonstrated experience in bioinformatics software engineering.

Essential

Demonstrated experience developing and maintaining large-scale, production bioinformatics systems in clinical or regulated environments.
Advanced-level Python development proficiency, including building testable, maintainable scientific software.
Strong expertise in workflow frameworks such as Nextflow, with experience using Seqera Platform in production settings.
Proven track record with development and optimisation for HPC/cloud platforms, including deploying and scaling pipelines in AWS.
Proficiency in working with Docker.
Experience with implementation and maintenance of NGS data analysis pipelines.
Proven experience implementing CI/CD, automated testing, and controlled release processes.
Proficiency in software versioning systems, e.g., Git, SVN.
Prior experience developing software in a regulated environment (ISO 13485, EN/IEC 62304, ISO 15189, or other).
Strong understanding of NGS assays (oncology preferred) and clinical-grade data processing requirements.

Desired

Hands-on experience with DRAGEN, Sentieon, or equivalent high-performance NGS analysis platforms.
Experience with AWS Health Omics or similar managed genomics platforms.
Experience with AWS products, including EC2, Batch, S3, and Lambda.
Proficiency in a compiled language, preferably C or C++.
Experience with algorithm and systems design for parallel computing.
Experience with Singularity or equivalent container runtimes.
Proficiency in R.

Dice Id: 10120137
Position Id: 72565-10367-1793730299
Posted 5 days ago

Fitment

Dice Job Match Score™

To see how well you match this job, please log in or create an account.

Once logged in, be sure to complete your profile to get the most accurate match score.

Create job alert

Never miss an opportunity! Create an alert based on the job you applied for.

Remote

•

3d ago

Easy Apply

Contract

Depends on Experience

Sr Bioinformatics Scientist – Algorithm & Assay Development (Remote, US)

Remote

•

3d ago

Easy Apply

Contract

Depends on Experience

Senior Bioinformatics & Genomics Data System Engineer

Remote

•

Today

Full-time

USD 113,600.00 - 142,000.00 per year

Senior Bioinformatics & Molecular Systems Consultant

Remote

•

Today

Contract

$85.00 - $115.00

Senior Bioinformatics Software Engineer

Skills

Summary

Dice Job Match Score™

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Senior Bioinformatics Software Engineer

Job Details

Skills

Summary

Dice Job Match Score™

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