Bioinformatics Analyst, Genomic Data

Job Description

Bioinformatics Support II - Genomic Data & Pipeline Analyst

***** An active NACI clearance or the ability to obtain a NACI clearance is required for consideration. ***

The Bioinformatics Support II role provides advanced scientific and analytical support to CDC genomic surveillance programs. This position serves as a bridge between laboratory science and computational analysis, supporting the execution of genomic surveillance pipelines and analysis of sequencing data to inform public health operations.

Compensation & Benefits:

Pay commensurate with experience.
Full-time benefits include Medical, Dental, Vision, 401K, and other possible benefits as provided. Benefits are subject to change with or without notice.

Bioinformatics Support II - Genomic Data & Pipeline Analyst Responsibilities Include:
Execute and monitor amplicon and metagenomic sequencing pipelines
Perform QC checks on sequencing data
Analyze variant trends and lineage assignments
Generate reports and visualizations
Maintain reproducible workflows
Perform QC on sequencing outputs (coverage, lineage, variants)
Analyze genomic data using tools such as:
Nextclade
Freyja
Minimap2
Work in Linux/Unix environments
Develop scripts in Python, R, or Bash
Maintain reproducible workflows using Nextflow or Snakemake
Collaborate with lab and epidemiology teams

Bioinformatics Support II - Genomic Data & Pipeline Analyst Experience, Education, Skills, Abilities requested:
Master's or PhD in Bioinformatics, Microbiology, or related field
Experience with tools: Nextclade, Freyja, Minimap2
Python/R/Bash proficiency
Linux/Unix experience
Strong communication and analytical skills
Ability to work independently and resolve problems without constant supervision
Excellent written and verbal communication skills
Advanced proficiency in Microsoft Office (Outlook, Word, Excel, PowerPoint)
Must pass the pre-employment qualifications of Cherokee Federal

Company Information:
Cherokee Nation Integrated Health (CNIH) is a part of Cherokee Federal - the division of tribally owned federal contracting companies owned by Cherokee Nation Businesses. As a trusted partner for more than 60 federal clients, Cherokee Federal LLCs are focused on building a brighter future, solving complex challenges, and serving the government's mission with compassion and heart. To learn more about CNIH, visit cherokee-federal.com.

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Cherokee Federal is a military-friendly employer. Veterans and active military transitioning to civilian status are encouraged to apply.

Similar Job Titles
Bioinformatics Analyst
Genomic Data Analyst
Computational Biology Analyst

Keywords:

• Bioinformatics Pipelines
• Genomics
• Variant Analysis
• Linux
• Public Health Data

Legal Disclaimer: All qualified applicants will receive consideration for employment without regard to protected veteran status, disability or any other status protected under applicable federal, state or local law.
Many of our job openings require access to government buildings or military installations.